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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911903.1_cds_XP_016461889.1_55167
CDS Infomation

[gene=LOC107785166] [db_xref=GeneID:107785166] [protein=probable acyl-activating enzyme 17, peroxisomal isoform X3] [protein_id=XP_016461889.1] [location=join(5774..5997,6997..7201,8097..8137,8212..8337,9769..9845,10271..10491,11209..11303,11572..11788,13617..13742,13824..13922,14325..14537,14608..14712)] [gbkey=CDS]
Sequence

ATGAATATTTCTTTCTCTGTTAGTCCTGAATGTATTTTGCGTGAAACTCCGTTGCACCCT
GGTGGTCAGTGGCTTCCTGGAGCATGTTTCAATCCTGCAGAGAATTGCTTGAGTTTGATT
GGAAATAGGAGCATAAGTGACGTAGTTGTGATAACTCGCGATGAAGGAGATGATGAGGCA
CCTGTTACCAAATTGACTCTTGAGGAACTAAGATCAGCAGTATGGAGAGTCGCATATGCC
ATTGATACACTGGGATTGAAAAAAGGATCTGCAATTGCCATAGATATGCCAATGGATGTC
AATTCCGTGGTGATCTACTTGGCAGTCGTTATTGCTGGTTATATGGTTGTCTCAATTGCT
GACAGTTTTGCGCCAAATGAAATTTCGACGAGACTCGTGATATCAAAAGCAAAGGCTATT
TTCACTCAGGATTTCATTAGCCGTGGCGGAAAAAAACTACCACTGTACAGCAAAGTCATT
GATGCTCAATCACCAATAGCAATTGTAATTCCGAATAGAAGCTCCACCTCGAGCATAAAA
TTGCGTGATGGTGACATTTCATGGCATGAATTCCTAGAAAGAGTAGACGAATCTAACAGG
AAGTTTGAGTATATTGGGGTGGAACTACCTGCTGAAGCATTCACAAATATCCTTTTCTCT
TCTGGCACGACAGGGGAACCAAAGGCGATTCCGTGGACTACCACTACACCCCTTAAGGCA
GCTGCTGATGGATGGTCCCACTTGAACATTGGCAAAGGTGATGTGGTGGCCTGGCCGACT
AATCTTGGATGGATGATGGGCCCTTTCCTAATTTACTGCACTCTTCTGAATGGAGCAACC
ATGGCCTTACACAATGGGTCCCCCCTTGGCTCTGGCTTTGCTAAGTTTGTGCAGGATGCT
AAAGTAACTATGCTTGGGGTGGTCCCAAGTATTGTGAGGACATGGAAATCTACAAATTGC
ACTGCTGGTTATGATTGGTCAGCCATCTGCCGCTTTGCCTCCACTGGTGAAGCATCTGGT
GTGGATGAATCCCTTTGGCTGATGGGAAGAGCTCATTACAAGCCTGTAATAGAGATCTGT
GGTGGGACAGAAATTGGTGGTGGATTTATTGCTGGTTCGTTGTTGCAACCACAATCTTTA
TCTGCTTTTAGCACAGCAGCTATGGGTTGTAGTCTATTTATTATTGGCGAAGATGGGTCC
CCTAGACCATCAGATGTTCCTGGGATTGGTGAACTGGCCCTTGGTCCCCTTCTACTTGGG
GCGTCGAGCACACTGCTGAATGCTGACCACTATGGTGTCTACTTCAAAGGAATGCCAGTT
TGGAATGGAAAGGTTCTGAGAAGACATGGAGATGTATTTGAGCGTACTTCTAGAGGTTAT
TATCGTGCACATGGCCGTGCAGATGACACCATGAATCTGGGGGGTGTGAAGGTAAGTTCT
GTCGAGATTGAGAAAGTTTGTAATGCAGTTGCTGAAACTATCCTTGAGACGGCAGCTATT
GGGGTACCACCTCCTGGAGGTGGCCCTGATAAGTTAGTTATCGCCGTTGTATTTAAGGAT
TCTGAAGGGTCAAAGCACAACTTGAATTCATTGAAGTTCTCTTTCAACTCAGCTTTGCAA
AAGAAATTGAATCCTCTATTCAAGGTTTCACATATAGTAGCCCTCCCTTCCCTTCCAAGA
ACAGCAACAAATAAAGTCATGAGAAGAGTTTTGAGACACCAATTCTCTCAAATTGGCTCT
AAACTGTGA

Peptide Sequence

PEP ID

XP_016461889.1
PEP Infomation

PREDICTED: probable acyl-activating enzyme 17, peroxisomal isoform X3 [Nicotiana tabacum]
Sequence

MNISFSVSPECILRETPLHPGGQWLPGACFNPAENCLSLIGNRSISDVVVITRDEGDDEA
PVTKLTLEELRSAVWRVAYAIDTLGLKKGSAIAIDMPMDVNSVVIYLAVVIAGYMVVSIA
DSFAPNEISTRLVISKAKAIFTQDFISRGGKKLPLYSKVIDAQSPIAIVIPNRSSTSSIK
LRDGDISWHEFLERVDESNRKFEYIGVELPAEAFTNILFSSGTTGEPKAIPWTTTTPLKA
AADGWSHLNIGKGDVVAWPTNLGWMMGPFLIYCTLLNGATMALHNGSPLGSGFAKFVQDA
KVTMLGVVPSIVRTWKSTNCTAGYDWSAICRFASTGEASGVDESLWLMGRAHYKPVIEIC
GGTEIGGGFIAGSLLQPQSLSAFSTAAMGCSLFIIGEDGSPRPSDVPGIGELALGPLLLG
ASSTLLNADHYGVYFKGMPVWNGKVLRRHGDVFERTSRGYYRAHGRADDTMNLGGVKVSS
VEIEKVCNAVAETILETAAIGVPPPGGGPDKLVIAVVFKDSEGSKHNLNSLKFSFNSALQ
KKLNPLFKVSHIVALPSLPRTATNKVMRRVLRHQFSQIGSKL

Transcript Sequence

Gene sequence data has not been registered.